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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015861992.1_cds_XP_016515143.1_27517
CDS Infomation

[gene=LOC107831861] [db_xref=GeneID:107831861] [protein=CSC1-like protein At4g02900] [protein_id=XP_016515143.1] [location=join(14641..14954,15148..15297,15696..15831,15914..16015,16242..16361,16493..16573,17639..17979,18418..18663,19316..19640,20126..20359,20532..20735)] [gbkey=CDS]
Sequence

ATGGCTAGCAGTGATGATATTCTTCTGTCAGCTGTGCTCAATCTTCTATCTGCATTTGCA
TTTCTTGTGGCCTTTGCTATTCTACGACTCCAGCCATTCAATGACAGAGTGTACTTCTCA
AAATGGTATCTGAAGGGAATACGAGCAAGCCCAAGAAGTTCCGGAGCATTTGTGAGGAAA
TTTGTCAACTTGGATTGCAGAACATACATAAGGTTCCTGAATTGGATGCCTGCAGCTCTA
AGAATGCCAGAACCAGAGCTTATCGATCATGCTGGTCTTGATTCTGCTGTCTATATACGG
ATATACCTTCTTGGATTGAAAATCTTTGTTCCTATAGCACTATTTTCATTTGGGGTTTTA
GTGCCTGTCAATTGGACTGGGAAACATTTAGAGCAAATTGAGGATCTAACATTCAGCGGT
ATCGATAAACTTTCGATATCCAATGTGCCTTCTGGATCAAAGAGGTTTTGGGCACACCTG
GTAATGGCTTATGCAGTCACGTTTTGGACCTGCTATATACTATACAAAGAATATCATATA
ATATCAACCATGAGGCTGCAGTTTCTTGCCTCTGAAAATCGTCGGCCTGATCAGTTTACT
GTCCTTGTGAGAAATGTCCCTCCAGATCCAGATGAATCAGTGAGCGAGCATGTTGAACAT
TTCTTTTGCGTGAATCATCCAGATCATTATCTAACACACCAGGTTGTTTACAATGCAAAT
AATCTAGCTAAATTGGTGGAAAAGAAGAAGAGCTATCAAAATTGGCTTACATACTACCAA
ACTAAGTATGAGAGAAACCCTAAGATTAAGCCAAAGACGAAGACAGGGTTTTGGGGCCTT
TGGGGGGAAACTGTGGACGCCATTGACTATTATACCGCTGAAATTGAGAAGTTAAGTAAA
GAAGAAGCTTTAGAAAGAGAAAAAGTTATGAGTGATCCCAAGGCAATAGTTCCTGCAGCA
TTTGTTTCATTTAAATCTCGTTGGGGAGCGGCTGTCTGTGCTCAAACACAACAATCATGT
AACCCAACCATTTGGTTGACACAATGGGCTCCTGAACCACGTGATGTCTATTGGGATAAT
CTATCAATACCATTTGTTGAACTCAATGTCCGCAAACTGCTAATGGCTGTTGCTTTCTTC
TTTCTTACATTCTTTTTTATGATCCCTATTGCATTCGTTCAGTCTTTGGCAAGCATTGAT
GGTATTGAGAATAAACTTCCCGTCTTGAGGCCGTTGATACAGATGGAAGTTGTCAAATCT
TTTATCCAAGGTGTTCTTCCTGGGATTATACTGAAGATTTTTCTGATTCTTCTTCCTATG
ATTCTAATGGCCATGTCAAAAATAGAAGGCTATACATCACTTTCATCTTTGGACAGAAGA
TCAGCAACTAAATATTATTTTTTTATCCTTGTCAACGTGTTCTTGGGAAGTATCATCACT
GGAGCAGCATTTGAGCAGCTTCAGAGATTTGTGGAAGAGCCTCCATCAGAAATTCCAAAA
ACAGTTGGTGTAGCTATTCCGTTGAAGGCTACTTTCTTCATTACCTACATAATGGTTGAT
GGTTGGGCTGGAATTGCTGCAGAGATTCTTAGATTGGTTCCATTAGTTATGTTTCATCTT
AAGAATACGTTTCTGGTAAAGACAGACCAGGATAGAGAGCAGGCTACAGATCCTGGTTCG
TTGAATTTCTCTGTATCAGAACCTCGCATACAACTGTACTTCCTACTAGGCCTTGTGTAC
TCAGTGGTCACACCCATACTCCTGCCTTTCATCATCGTCTTCTTCGCATTCGCTTATATG
GTTTTCCGCCATCAGATCATCAATGTGTATGATCAGAAGTATGAGAGCGGCGCATCATTC
TGGCCAGATGTGCATCGTCGTATAATTGTAGGTTTGGTTATATCCCAGCTTCTATTGCTT
GGACTGTTGAGCACCAAAAATGTTGCCAGATCAAATGTAATACTGATTGCACTTCCAATT
CTGACAATTTGGTTCCATATATTTTGCAAGGGCCGATTTGAGTCAGCATTTGTCAAATTC
CCCTTGCAGGATGCAATGGTGAAGGATACACTAGAACGGGCGACAGAACCAAACCTTAAT
TTAAAAGCATATCTCAAGGATGCTTATGTACACCCAGTTTTTAAAGGTGTAGAGTTTGAG
AGACCGACAGCACTTGACGATGAGGAGAATAATCCACTTGTTCCAACCAAAAGATGTAGG
GGTAGTAAGACTCAGTCTGAAGAGGGCGTCTGA

Peptide Sequence

PEP ID

XP_016515143.1
PEP Infomation

PREDICTED: CSC1-like protein At4g02900 [Nicotiana tabacum]
Sequence

MASSDDILLSAVLNLLSAFAFLVAFAILRLQPFNDRVYFSKWYLKGIRASPRSSGAFVRK
FVNLDCRTYIRFLNWMPAALRMPEPELIDHAGLDSAVYIRIYLLGLKIFVPIALFSFGVL
VPVNWTGKHLEQIEDLTFSGIDKLSISNVPSGSKRFWAHLVMAYAVTFWTCYILYKEYHI
ISTMRLQFLASENRRPDQFTVLVRNVPPDPDESVSEHVEHFFCVNHPDHYLTHQVVYNAN
NLAKLVEKKKSYQNWLTYYQTKYERNPKIKPKTKTGFWGLWGETVDAIDYYTAEIEKLSK
EEALEREKVMSDPKAIVPAAFVSFKSRWGAAVCAQTQQSCNPTIWLTQWAPEPRDVYWDN
LSIPFVELNVRKLLMAVAFFFLTFFFMIPIAFVQSLASIDGIENKLPVLRPLIQMEVVKS
FIQGVLPGIILKIFLILLPMILMAMSKIEGYTSLSSLDRRSATKYYFFILVNVFLGSIIT
GAAFEQLQRFVEEPPSEIPKTVGVAIPLKATFFITYIMVDGWAGIAAEILRLVPLVMFHL
KNTFLVKTDQDREQATDPGSLNFSVSEPRIQLYFLLGLVYSVVTPILLPFIIVFFAFAYM
VFRHQIINVYDQKYESGASFWPDVHRRIIVGLVISQLLLLGLLSTKNVARSNVILIALPI
LTIWFHIFCKGRFESAFVKFPLQDAMVKDTLERATEPNLNLKAYLKDAYVHPVFKGVEFE
RPTALDDEENNPLVPTKRCRGSKTQSEEGV

Transcript Sequence

Gene sequence data has not been registered.